consensusDE - RNA-seq analysis using multiple algorithms
This package allows users to perform DE analysis using multiple algorithms. It seeks consensus from multiple methods. Currently it supports "Voom", "EdgeR" and "DESeq". It uses RUV-seq (optional) to remove unwanted sources of variation.
Last updated 5 months ago
transcriptomicsmultiplecomparisonclusteringsequencingsoftware
4.00 score 140 dependenciesKinSwingR - KinSwingR: network-based kinase activity prediction
KinSwingR integrates phosphosite data derived from mass-spectrometry data and kinase-substrate predictions to predict kinase activity. Several functions allow the user to build PWM models of kinase-subtrates, statistically infer PWM:substrate matches, and integrate these data to infer kinase activity.
Last updated 5 months ago
proteomicssequencematchingnetwork
4.00 score 29 dependencies